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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937021.1_cds_XP_016482430.1_73656
CDS Infomation

[gene=LOC107803263] [db_xref=GeneID:107803263] [protein=serine hydroxymethyltransferase, mitochondrial-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016482430.1] [location=complement(join(19160..19308,19547..19657,19738..19849,20045..20122,20269..20334,20636..20740,20860..21057,21153..21245,21731..>21823))] [gbkey=CDS]
Sequence

ACTGATACGAAGAAGATATCTGCCGTCTCTATATTTTTTGAGACCATGCCATACAGACTG
AATGAGAGCACTGGCTACATTGACTATGACCAGCTTGAGAAAAGTGCCACACTCTTTAGG
CCAAAGTTAATTGTCGCTGGTGCTAGTGCTTATGCACGTCTTTATGACTATGCACGTATC
CGAAAGGTTTGTGACAAACAGAAGGCTATCATGTTGGCAGATATGGCTCATATTAGTGGG
TTAGTTGCAGCTGGAGTCATCCCATCACCATTTGATTATGCAGATGTTGTGACTACCACA
ACCCACAAATCCCTTCGCGGGCCTCGTGGTGCCATGATTTTCTTCCGGAAGGGTGTGAAG
GAGGTTAATAAGCAAGGAAAGGAGGTGTTGTACGACTATGAAGATAAAATTAACCAGGCA
GTCTTCCCTGGACTTCAAGGTGGTCCTCACAATCATACAATTACTGGCTTGGCAGTTGCT
TTGAAACAGGCAATGACTCCAGAATACAAAGCTTACCAAGAGCAATGCCTTAGCAACTGC
TCAAAATTTGCCCAGGCTTTAGCGGGAATGGGTTATGAACTTGTTTCTGGTGGAACAGAG
AATCACTTGGTCTTGGTGAACTTGAAAAACAAGGGTATTGATGGTTCTAGGGTTGAAAAA
GTTTTGGAAGCGGTACATATTGCAGCCAATAAGAACACTGTTCCTGGAGATGTATCTGCC
ATGGTCCCTGGTGGCATCAGAATGGGGACTCCTGCACTCACATCAAGGGGATTTATTGAG
GAAGATTTTGTGAAAGTTGCTGAATTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAATA
AAGGGTGAAGCTCAAGGAACAAAGTTGAAAGACTTTGTGACAACACTACAGTCTAGTGCT
TCCATCCAGTCGGAGATTGCAAAACTCCGCCATGGTGTGGAGGAGTATGCAAAGCAGTTC
CCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTGA

Peptide Sequence

PEP ID

XP_016482430.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana tabacum]
Sequence

MAMATALRRLSSSVDKPIKRLYNGGSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEEVD
PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID
MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLS
HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYD
YARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR
KGVKEVNKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEYKAYQEQC
LSNCSKFAQALAGMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG
DVSAMVPGGIRMGTPALTSRGFIEEDFVKVAEFFDAAVKIAVKIKGEAQGTKLKDFVTTL
QSSASIQSEIAKLRHGVEEYAKQFPTIGFEKETMKYKN

Transcript Sequence

Gene sequence data has not been registered.